EnhancerDB
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  3. rs57472462[chr17:48955626]
Enhancers that have rs57472462[chr17:48955626]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs57472462[chr17:48955626]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48955157 48955648 ZNF274 GTRD no Bone Marrow (K562) 21770115
chr17 48955193 48955667 ZNF143 GTRD no Epithelial (MCF-7) 21770116
chr17 48955547 48956201 TCF7L2 GTRD no Colon (HCT116) 21770119
chr17 48955596 48956173 TCF7L2 GTRD no Colon (HCT116) 21770120
chr17 48955620 48955632 HLF JASPAR yes 54727688
chr17 48955621 48955631 CEBPB JASPAR yes 54727689
chr17 48955621 48955631 CEBPD JASPAR yes 54727690
chr17 48955621 48955631 CEBPE JASPAR yes 54727691
chr17 48955621 48955631 CEBPG JASPAR yes 54727692
Genes associated with rs57472462[chr17:48955626], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More