EnhancerDB
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  3. rs574852069[chr6:44050662]
Enhancers that have rs574852069[chr6:44050662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 44050434 44050837 vista52063
VISTA
Transcript factors that have rs574852069[chr6:44050662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44050548 44051020 POLR2A UCSC Txn Factor no Conserved 108540419
chr6 44050650 44050665 RUNX2 JASPAR yes 70369648
chr6 44050650 44050665 RUNX2 JASPAR yes 101822182
chr6 44050654 44050674 RREB1 JASPAR yes 70369649
chr6 44050654 44050674 RREB1 JASPAR yes 101822183
chr6 44050660 44050670 ZNF740 JASPAR yes 70369650
chr6 44050660 44050670 ZNF740 JASPAR yes 101822184
Genes associated with rs574852069[chr6:44050662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More