EnhancerDB
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  3. rs575054198[chr1:204265637]
Enhancers that have rs575054198[chr1:204265637]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 204261217 204266185 vista127
VISTA
Transcript factors that have rs575054198[chr1:204265637]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204265631 204265637 TCF4 TRANSFAC yes 34689878
chr1 204265631 204265637 TCF4 TRANSFAC yes 71155865
chr1 204265631 204265646 RUNX2 JASPAR yes 34689879
chr1 204265631 204265646 RUNX2 JASPAR yes 71155866
Genes associated with rs575054198[chr1:204265637], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More