EnhancerDB
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  3. rs575072947[chr5:172227164]
Enhancers that have rs575072947[chr5:172227164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172226784 172227709 vista50176
VISTA
Transcript factors that have rs575072947[chr5:172227164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172226947 172227615 STAT3 UCSC Txn Factor no Conserved 108537512
chr5 172227152 172227167 TFAP2C JASPAR yes 67828815
chr5 172227152 172227167 TFAP2C JASPAR yes 70763537
chr5 172227153 172227164 TFAP2A JASPAR yes 67828816
chr5 172227153 172227164 TFAP2B JASPAR yes 67828817
chr5 172227153 172227164 TFAP2C JASPAR yes 67828818
chr5 172227153 172227164 TFAP2A JASPAR yes 70763538
chr5 172227153 172227164 TFAP2B JASPAR yes 70763539
chr5 172227153 172227164 TFAP2C JASPAR yes 70763540
chr5 172227153 172227165 INSM1 JASPAR yes 67828819
chr5 172227153 172227165 TFAP2A JASPAR yes 67828820
chr5 172227153 172227165 TFAP2B JASPAR yes 67828821
chr5 172227153 172227165 TFAP2C JASPAR yes 67828822
chr5 172227153 172227165 INSM1 JASPAR yes 70763541
chr5 172227153 172227165 TFAP2A JASPAR yes 70763542
chr5 172227153 172227165 TFAP2B JASPAR yes 70763543
chr5 172227153 172227165 TFAP2C JASPAR yes 70763544
Genes associated with rs575072947[chr5:172227164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More