EnhancerDB
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  3. rs575113998[chr1:157997728]
Enhancers that have rs575113998[chr1:157997728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 157969514 158001213 enh12308
Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575113998[chr1:157997728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 157997722 157997735 NFKB1 JASPAR yes 32459506
chr1 157997722 157997735 NFKB2 JASPAR yes 32459507
chr1 157997723 157997734 NFKB1 JASPAR yes 32459508
chr1 157997724 157997728 LFA1 TRANSFAC yes 32459509
chr1 157997724 157997734 NFKB1 JASPAR yes 32459510
chr1 157997725 157997740 TFAP2A JASPAR yes 32459511
chr1 157997725 157997740 TFAP2C JASPAR yes 32459512
chr1 157997728 157997739 EBF1 JASPAR yes 32459513
chr1 157997728 157997739 TFAP2A JASPAR yes 32459514
chr1 157997728 157997739 TFAP2B JASPAR yes 32459515
chr1 157997728 157997739 TFAP2C JASPAR yes 32459516
chr1 157997728 157997740 TFAP2C JASPAR yes 32459517
Genes associated with rs575113998[chr1:157997728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More