EnhancerDB
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  3. rs575196053[chr1:8279098]
Enhancers that have rs575196053[chr1:8279098]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575196053[chr1:8279098]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8279087 8279100 NFKB2 JASPAR yes 26529208
chr1 8279088 8279099 NFKB1 JASPAR yes 26529209
chr1 8279097 8279112 FOXP1 JASPAR yes 26529210
chr1 8279097 8279112 MEF2C JASPAR yes 26529211
chr1 8279098 8279110 FOXC2 JASPAR yes 26529212
chr1 8279098 8279110 MEF2A JASPAR yes 26529213
chr1 8279098 8279110 MEF2B JASPAR yes 26529214
chr1 8279098 8279110 MEF2D JASPAR yes 26529215
Genes associated with rs575196053[chr1:8279098], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More