EnhancerDB
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  3. rs575196294[chr3:189805938]
Enhancers that have rs575196294[chr3:189805938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189786505 189806245 enh36260
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs575196294[chr3:189805938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189805931 189805942 CDX2 JASPAR yes 8620251
chr3 189805932 189805943 HOXA10 JASPAR yes 8620252
chr3 189805933 189805942 CDX1 JASPAR yes 8620253
chr3 189805933 189805943 HOXA13 JASPAR yes 8620254
chr3 189805933 189805943 HOXB13 JASPAR yes 8620255
chr3 189805933 189805943 HOXD13 JASPAR yes 8620256
chr3 189805937 189805943 TBP TRANSFAC yes 8620257
Genes associated with rs575196294[chr3:189805938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More