EnhancerDB
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  3. rs575247425[chr2:238607989]
Enhancers that have rs575247425[chr2:238607989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238592145 238619475 enh19401
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575247425[chr2:238607989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238607972 238607993 IRF1 JASPAR yes 82134140
chr2 238607973 238607994 IRF1 JASPAR yes 82134141
chr2 238607974 238607989 STAT2 JASPAR yes 82134142
chr2 238607978 238607999 IRF1 JASPAR yes 82134143
chr2 238607979 238607994 FOXP1 JASPAR yes 82134144
chr2 238607979 238608000 IRF1 JASPAR yes 82134145
chr2 238607983 238608004 IRF1 JASPAR yes 82134146
chr2 238607984 238607999 FOXP1 JASPAR yes 82134147
chr2 238607984 238608005 IRF1 JASPAR yes 82134148
chr2 238607985 238608006 IRF1 JASPAR yes 82134149
chr2 238607986 238608001 FOXP1 JASPAR yes 82134150
chr2 238607986 238608007 IRF1 JASPAR yes 82134151
chr2 238607987 238608008 IRF1 JASPAR yes 82134152
chr2 238607988 238608003 FOXP1 JASPAR yes 82134153
chr2 238607988 238608009 IRF1 JASPAR yes 82134154
chr2 238607989 238608004 FOXP1 JASPAR yes 82134155
Genes associated with rs575247425[chr2:238607989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More