EnhancerDB
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  3. rs575283792[chr17:80830754]
Enhancers that have rs575283792[chr17:80830754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs575283792[chr17:80830754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80830109 80830868 TCF7L2 GTRD no Colon (HCT116) 21800950
chr17 80830109 80830868 TCF7L2 GTRD no Colon (HCT116) 108313075
chr17 80830129 80830943 TCF7L2 GTRD no Colon (HCT116) 21800951
chr17 80830129 80830943 TCF7L2 GTRD no Colon (HCT116) 108313076
chr17 80830404 80830988 TCF7L2 GTRD no Colon (HCT116) 21800952
chr17 80830404 80830988 TCF7L2 GTRD no Colon (HCT116) 108313077
chr17 80830404 80830988 TCF7L2 GTRD no Colon (HCT116) 108313078
chr17 80830434 80830947 ZNF143 GTRD no Epithelial (MCF-7) 21800953
chr17 80830434 80830947 ZNF143 GTRD no Epithelial (MCF-7) 108313079
chr17 80830497 80830773 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800954
chr17 80830497 80830773 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313080
chr17 80830514 80831174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800955
chr17 80830514 80831174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313081
chr17 80830514 80831174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313082
chr17 80830748 80830767 CTCF JASPAR yes 56390313
chr17 80830752 80830762 FIGLA JASPAR yes 56390314
chr17 80830754 80830759 USF2 TRANSFAC yes 56390315
Genes associated with rs575283792[chr17:80830754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More