EnhancerDB
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  3. rs575318987[chr1:182061480]
Enhancers that have rs575318987[chr1:182061480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182051005 182073915 enh12433
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Placenta Thyroid Uterus Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs575318987[chr1:182061480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182061394 182062424 ZNF143 GTRD no Epithelial (MCF-7) 21356921
chr1 182061427 182062203 ZNF143 GTRD no Epithelial (MCF-7) 21356922
chr1 182061432 182062331 ZNF143 GTRD no Epithelial (MCF-7) 21356923
chr1 182061441 182061821 ZNF274 GTRD no Liver (HepG2) 21356924
chr1 182061445 182062091 ZNF143 GTRD no Epithelial (MCF-7) 21356925
chr1 182061453 182061951 ZNF143 GTRD no Epithelial (MCF-7) 21356926
chr1 182061461 182062076 ZNF143 GTRD no Epithelial (MCF-7) 21356927
chr1 182061465 182062105 ZNF143 GTRD no Epithelial (MCF-7) 21356928
chr1 182061478 182061490 NHLH1 JASPAR yes 33589183
chr1 182061479 182061489 NHLH1 JASPAR yes 33589184
Genes associated with rs575318987[chr1:182061480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More