EnhancerDB
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  3. rs575399380[chr1:226857584]
Enhancers that have rs575399380[chr1:226857584]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575399380[chr1:226857584]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226857563 226857584 IRF1 JASPAR yes 35830421
chr1 226857567 226857587 RREB1 JASPAR yes 35830425
chr1 226857567 226857588 IRF1 JASPAR yes 35830426
chr1 226857568 226857589 IRF1 JASPAR yes 35830427
chr1 226857569 226857584 FOXP1 JASPAR yes 35830428
chr1 226857572 226857586 IRF7 JASPAR yes 35830429
chr1 226857573 226857594 IRF1 JASPAR yes 35830430
chr1 226857574 226857589 FOXP1 JASPAR yes 35830432
chr1 226857575 226857590 STAT2 JASPAR yes 35830433
chr1 226857578 226857590 IRF1 JASPAR yes 35830434
chr1 226857580 226857586 TCF4 TRANSFAC yes 35830435
chr1 226857580 226857595 FOXP1 JASPAR yes 35830436
Genes associated with rs575399380[chr1:226857584], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More