EnhancerDB
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  3. rs575477420[chr6:47062636]
Enhancers that have rs575477420[chr6:47062636]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47048805 47068805 enh23286
Liver Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs575477420[chr6:47062636]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47062629 47062639 NFKB1 JASPAR yes 101996797
chr6 47062629 47062640 NFKB1 JASPAR yes 101996798
chr6 47062632 47062643 NFIL3 JASPAR yes 101996799
chr6 47062634 47062644 CEBPD JASPAR yes 101996800
chr6 47062634 47062645 CEBPA JASPAR yes 101996801
Genes associated with rs575477420[chr6:47062636], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More