EnhancerDB
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  3. rs575477869[chr6:91071997]
Enhancers that have rs575477869[chr6:91071997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 91070116 91088333 enh23421
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs575477869[chr6:91071997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 91071985 91071997 MEF2A JASPAR yes 103451498
chr6 91071985 91071997 MEF2B JASPAR yes 103451499
chr6 91071985 91071997 MEF2D JASPAR yes 103451500
chr6 91071987 91071998 CDX2 JASPAR yes 103451501
chr6 91071987 91072002 FOXP1 JASPAR yes 103451502
chr6 91071988 91071999 HOXA10 JASPAR yes 103451503
chr6 91071988 91072009 IRF1 JASPAR yes 103451504
chr6 91071989 91071998 CDX1 JASPAR yes 103451505
chr6 91071989 91071999 HOXA13 JASPAR yes 103451506
chr6 91071989 91071999 HOXB13 JASPAR yes 103451507
chr6 91071989 91071999 HOXD13 JASPAR yes 103451508
chr6 91071989 91072004 FOXP1 JASPAR yes 103451509
chr6 91071991 91072006 FOXP1 JASPAR yes 103451510
chr6 91071992 91072013 IRF1 JASPAR yes 103451511
chr6 91071993 91071999 TBP TRANSFAC yes 103451512
chr6 91071993 91072008 FOXP1 JASPAR yes 103451513
chr6 91071996 91072010 STAT1 JASPAR yes 103451514
chr6 91071996 91072011 PRDM1 JASPAR yes 103451515
chr6 91071996 91072011 STAT2 JASPAR yes 103451516
Genes associated with rs575477869[chr6:91071997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More