EnhancerDB
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  3. rs575499003[chr12:65053858]
Enhancers that have rs575499003[chr12:65053858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575499003[chr12:65053858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65053851 65053864 POU2F2 JASPAR yes 121422386
chr12 65053852 65053860 FOXL1 JASPAR yes 121422387
chr12 65053852 65053861 POU3F4 JASPAR yes 121422388
chr12 65053852 65053863 FOXB1 JASPAR yes 121422389
chr12 65053856 65053864 FOXL1 JASPAR yes 121422390
chr12 65053856 65053867 FOXB1 JASPAR yes 121422391
chr12 65053857 65053868 FOXB1 JASPAR yes 121422392
chr12 65053858 65053866 FOXL1 JASPAR yes 121422393
Genes associated with rs575499003[chr12:65053858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More