EnhancerDB
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  3. rs57550339[chr16:85272722]
Enhancers that have rs57550339[chr16:85272722]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs57550339[chr16:85272722]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85270716 85272888 TCF7L2 GTRD no Colon (HCT116) 21721801
chr16 85272503 85273276 TCF7L2 GTRD no Colon (HCT116) 21721827
chr16 85272707 85272722 MEF2C JASPAR yes 12037170
Genes associated with rs57550339[chr16:85272722], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More