EnhancerDB
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  3. rs57551544[chr16:29171023]
Enhancers that have rs57551544[chr16:29171023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr16 29170991 29171253 vista22322
VISTA
Transcript factors that have rs57551544[chr16:29171023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29170341 29171032 ZBTB33 GTRD no Brain (SK-N-SH) 21701846
chr16 29170341 29171032 ZBTB33 GTRD no Brain (SK-N-SH) 108191379
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 21701847
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 108191381
chr16 29171011 29171028 RARA JASPAR yes 10246744
chr16 29171011 29171028 RARA JASPAR yes 49363521
Genes associated with rs57551544[chr16:29171023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 29753784 29757327 - C16orf54 ENSG00000185905.3 29757327 582761 Esophagus 0.146289 14708