EnhancerDB
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  3. rs575520910[chr2:232477495]
Enhancers that have rs575520910[chr2:232477495]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs575520910[chr2:232477495]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435689
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435690
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435691
chr2 232477476 232477496 RREB1 JASPAR yes 81725875
chr2 232477478 232477498 RREB1 JASPAR yes 81725879
chr2 232477479 232477499 RREB1 JASPAR yes 81725880
chr2 232477480 232477500 RREB1 JASPAR yes 81725881
chr2 232477481 232477501 RREB1 JASPAR yes 81725882
chr2 232477483 232477503 RREB1 JASPAR yes 81725883
chr2 232477484 232477504 RREB1 JASPAR yes 81725884
chr2 232477485 232477495 SP1 JASPAR yes 81725885
chr2 232477486 232477496 ZNF740 JASPAR yes 81725886
chr2 232477486 232477506 RREB1 JASPAR yes 81725887
chr2 232477487 232477507 RREB1 JASPAR yes 81725888
chr2 232477488 232477498 ZNF740 JASPAR yes 81725889
chr2 232477489 232477499 ZNF740 JASPAR yes 81725890
chr2 232477490 232477510 RREB1 JASPAR yes 81725891
Genes associated with rs575520910[chr2:232477495], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More