EnhancerDB
  1. Home
  2. SNP
  3. rs575520993[chr5:148941944]
Enhancers that have rs575520993[chr5:148941944]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148937365 148947295 enh8790
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575520993[chr5:148941944]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148941936 148941947 DMRT3 JASPAR yes 66824494
chr5 148941940 148941945 GATA2 JASPAR yes 66824495
Genes associated with rs575520993[chr5:148941944], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More