EnhancerDB
  1. Home
  2. SNP
  3. rs575539845[chr1:117427844]
Enhancers that have rs575539845[chr1:117427844]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs575539845[chr1:117427844]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117425152 117428810 ZNF274 GTRD no Bone Marrow (K562) 21334101
chr1 117427837 117427851 TLX1 JASPAR yes 31848963
chr1 117427838 117427852 TLX1 JASPAR yes 31848964
Genes associated with rs575539845[chr1:117427844], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More