EnhancerDB
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  3. rs575589250[chr1:43993385]
Enhancers that have rs575589250[chr1:43993385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43989845 44027077 enh11814
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs575589250[chr1:43993385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43993375 43993394 RFX2 JASPAR yes 28502688
chr1 43993379 43993395 RFX2 JASPAR yes 28502689
chr1 43993379 43993395 RFX3 JASPAR yes 28502690
chr1 43993379 43993395 RFX4 JASPAR yes 28502691
Genes associated with rs575589250[chr1:43993385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More