EnhancerDB
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  3. rs575643579[chr1:39609779]
Enhancers that have rs575643579[chr1:39609779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575643579[chr1:39609779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39609772 39609784 PROX1 JASPAR yes 28257623
chr1 39609778 39609797 PAX5 JASPAR yes 28257624
Genes associated with rs575643579[chr1:39609779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More