EnhancerDB
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  3. rs57568553[chr1:117390149]
Enhancers that have rs57568553[chr1:117390149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs57568553[chr1:117390149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117390146 117390157 CDX2 JASPAR yes 31843923
chr1 117390147 117390158 HOXA10 JASPAR yes 31843924
Genes associated with rs57568553[chr1:117390149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More