EnhancerDB
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  3. rs575685955[chr12:46828140]
Enhancers that have rs575685955[chr12:46828140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575685955[chr12:46828140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46828091 46828290 ZNF143 GTRD no Epithelial (MCF-7) 21541609
chr12 46828131 46828146 MEF2A JASPAR yes 120619785
chr12 46828132 46828147 MEF2C JASPAR yes 120619786
chr12 46828133 46828145 MEF2A JASPAR yes 120619787
chr12 46828134 46828145 FOXC1 JASPAR yes 120619788
Genes associated with rs575685955[chr12:46828140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More