EnhancerDB
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  3. rs57572612[chr6:16673412]
Enhancers that have rs57572612[chr6:16673412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16673403 16673483 vista51162
VISTA
Transcript factors that have rs57572612[chr6:16673412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16673400 16673414 GATA2 JASPAR yes 70326445
chr6 16673400 16673414 GATA2 JASPAR yes 100325223
chr6 16673409 16673419 MYF6 JASPAR yes 70326447
chr6 16673409 16673419 MYF6 JASPAR yes 100325225
chr6 16673411 16673416 MYC TRANSFAC yes 70326448
chr6 16673411 16673416 MYC TRANSFAC yes 100325226
Genes associated with rs57572612[chr6:16673412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More