EnhancerDB
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  3. rs575807741[chr12:122600008]
Enhancers that have rs575807741[chr12:122600008]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs575807741[chr12:122600008]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122599997 122600009 INSM1 JASPAR yes 124268044
chr12 122600001 122600010 HIC2 JASPAR yes 124268045
chr12 122600004 122600008 LFA1 TRANSFAC yes 124268046
chr12 122600004 122600016 PKNOX1 JASPAR yes 124268047
chr12 122600004 122600016 PKNOX2 JASPAR yes 124268048
chr12 122600004 122600016 TGIF1 JASPAR yes 124268049
chr12 122600004 122600016 TGIF2 JASPAR yes 124268050
chr12 122600005 122600015 HEY2 JASPAR yes 124268051
chr12 122600005 122600015 ID4 JASPAR yes 124268052
chr12 122600005 122600015 TCF4 JASPAR yes 124268053
chr12 122600006 122600015 SNAI2 JASPAR yes 124268054
chr12 122600007 122600012 USF2 TRANSFAC yes 124268055
Genes associated with rs575807741[chr12:122600008], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More