EnhancerDB
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  3. rs575917494[chr17:2777255]
Enhancers that have rs575917494[chr17:2777255]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs575917494[chr17:2777255]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2777242 2777257 ZIC3 JASPAR yes 52780650
chr17 2777242 2777257 ZIC4 JASPAR yes 52780651
chr17 2777243 2777257 GLIS2 JASPAR yes 52780652
chr17 2777243 2777257 ZIC1 JASPAR yes 52780653
chr17 2777246 2777256 ZNF740 JASPAR yes 52780655
chr17 2777247 2777257 SP1 JASPAR yes 52780656
chr17 2777247 2777257 ZNF740 JASPAR yes 52780657
chr17 2777248 2777258 SP1 JASPAR yes 52780658
chr17 2777248 2777258 ZNF740 JASPAR yes 52780659
chr17 2777249 2777259 ZNF740 JASPAR yes 52780660
chr17 2777253 2777260 SP1 TRANSFAC yes 52780661
chr17 2777255 2777260 SP1 TRANSFAC yes 52780662
Genes associated with rs575917494[chr17:2777255], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More