EnhancerDB
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  3. rs575924653[chr16:89525777]
Enhancers that have rs575924653[chr16:89525777]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575924653[chr16:89525777]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89525769 89525779 RELA JASPAR yes 12347286
chr16 89525769 89525783 ONECUT2 JASPAR yes 12347287
chr16 89525769 89525783 ONECUT3 JASPAR yes 12347288
chr16 89525770 89525785 FOXA1 JASPAR yes 12347289
chr16 89525771 89525782 FOXB1 JASPAR yes 12347290
chr16 89525771 89525782 FOXC1 JASPAR yes 12347291
chr16 89525771 89525783 FOXC2 JASPAR yes 12347292
chr16 89525774 89525785 HOXA10 JASPAR yes 12347293
chr16 89525775 89525785 HOXB13 JASPAR yes 12347294
chr16 89525775 89525785 HOXD13 JASPAR yes 12347295
Genes associated with rs575924653[chr16:89525777], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More