EnhancerDB
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  3. rs575927575[chr6:34630092]
Enhancers that have rs575927575[chr6:34630092]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34618105 34636675 enh9069
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575927575[chr6:34630092]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34630079 34630094 FOXP1 JASPAR yes 101229935
chr6 34630080 34630095 FOXP1 JASPAR yes 101229936
chr6 34630081 34630096 FOXP1 JASPAR yes 101229937
chr6 34630081 34630102 IRF1 JASPAR yes 101229938
chr6 34630082 34630097 FOXP1 JASPAR yes 101229939
chr6 34630082 34630103 IRF1 JASPAR yes 101229940
chr6 34630083 34630098 FOXP1 JASPAR yes 101229941
chr6 34630085 34630100 FOXP1 JASPAR yes 101229942
chr6 34630086 34630107 IRF1 JASPAR yes 101229943
chr6 34630087 34630102 FOXP1 JASPAR yes 101229944
chr6 34630087 34630108 IRF1 JASPAR yes 101229945
chr6 34630088 34630109 IRF1 JASPAR yes 101229946
chr6 34630092 34630107 PRDM1 JASPAR yes 101229947
chr6 34630092 34630113 IRF1 JASPAR yes 101229948
Genes associated with rs575927575[chr6:34630092], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More