EnhancerDB
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  3. rs575956638[chr1:235153939]
Enhancers that have rs575956638[chr1:235153939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs575956638[chr1:235153939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235153761 235154265 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403164
chr1 235153772 235154212 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403165
chr1 235153896 235154426 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403166
chr1 235153912 235154172 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403167
chr1 235153914 235154310 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403168
chr1 235153927 235153941 RORA JASPAR yes 36343062
chr1 235153933 235153939 ESR1 TRANSFAC yes 36343063
chr1 235153935 235153939 ESR1 TRANSFAC yes 36343064
chr1 235153937 235154277 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403169
chr1 235153938 235153948 TEAD4 JASPAR yes 36343065
Genes associated with rs575956638[chr1:235153939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More