EnhancerDB
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  3. rs575984046[chr1:117412290]
Enhancers that have rs575984046[chr1:117412290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs575984046[chr1:117412290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117412279 117412294 FOXP1 JASPAR yes 31846399
chr1 117412280 117412301 IRF1 JASPAR yes 31846401
chr1 117412284 117412299 PRDM1 JASPAR yes 31846402
chr1 117412284 117412305 IRF1 JASPAR yes 31846403
chr1 117412285 117412300 FOXP1 JASPAR yes 31846404
chr1 117412285 117412306 ZNF263 JASPAR yes 31846405
chr1 117412286 117412307 IRF1 JASPAR yes 31846406
chr1 117412286 117412307 ZNF263 JASPAR yes 31846407
chr1 117412287 117412301 IRF7 JASPAR yes 31846408
chr1 117412288 117412302 STAT1 JASPAR yes 31846409
chr1 117412288 117412303 STAT2 JASPAR yes 31846410
Genes associated with rs575984046[chr1:117412290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More