EnhancerDB
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  3. rs576029678[chr1:203520424]
Enhancers that have rs576029678[chr1:203520424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs576029678[chr1:203520424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203518614 203520743 ZBTB33 GTRD no Brain (SK-N-SH) 21369441
chr1 203518802 203522161 ZNF274 GTRD no Cervix (HeLa-S3) 21369442
chr1 203518877 203522236 ZBTB33 GTRD no Brain (SK-N-SH) 21369443
chr1 203518928 203520793 ZBTB33 GTRD no Brain (SK-N-SH) 21369444
chr1 203519232 203521926 ZBTB33 GTRD no Brain (SK-N-SH) 21369457
chr1 203519275 203521022 ZNF274 GTRD no Cervix (HeLa-S3) 21369460
chr1 203519297 203521969 ZNF274 GTRD no Cervix (HeLa-S3) 21369462
chr1 203519983 203520939 ZNF274 GTRD no Cervix (HeLa-S3) 21369468
chr1 203520219 203521899 ZBTB33 GTRD no Brain (SK-N-SH) 21369469
chr1 203520228 203520879 ZNF274 GTRD no Cervix (HeLa-S3) 21369470
chr1 203520228 203520897 ZNF274 GTRD no Cervix (HeLa-S3) 21369471
chr1 203520258 203520889 ZNF274 GTRD no Cervix (HeLa-S3) 21369472
chr1 203520302 203520871 ZNF274 GTRD no Cervix (HeLa-S3) 21369473
chr1 203520319 203520831 ZBTB33 GTRD no Lung (A549) 21369474
chr1 203520343 203521201 ZNF274 GTRD no Cervix (HeLa-S3) 21369475
chr1 203520409 203520429 RREB1 JASPAR yes 34638953
chr1 203520409 203520430 IRF1 JASPAR yes 34638954
chr1 203520410 203520431 IRF1 JASPAR yes 34638955
chr1 203520415 203520436 IRF1 JASPAR yes 34638956
chr1 203520416 203520431 FOXP1 JASPAR yes 34638958
chr1 203520416 203520437 IRF1 JASPAR yes 34638959
chr1 203520417 203520428 FOXP2 JASPAR yes 34638960
chr1 203520417 203520429 FOXC2 JASPAR yes 34638961
chr1 203520417 203520432 STAT2 JASPAR yes 34638962
chr1 203520418 203520433 FOXP1 JASPAR yes 34638963
chr1 203520420 203520435 FOXP1 JASPAR yes 34638964
chr1 203520421 203520436 FOXP1 JASPAR yes 34638965
chr1 203520422 203520437 FOXP1 JASPAR yes 34638966
chr1 203520423 203520438 FOXP1 JASPAR yes 34638967
chr1 203520424 203520439 FOXP1 JASPAR yes 34638968
Genes associated with rs576029678[chr1:203520424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More