EnhancerDB
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  3. rs576087862[chr12:125205399]
Enhancers that have rs576087862[chr12:125205399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs576087862[chr12:125205399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125204795 125205445 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582321
chr12 125204795 125205445 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069609
chr12 125205057 125205713 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21582324
chr12 125205057 125205713 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108069612
chr12 125205057 125205713 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108069613
chr12 125205172 125205616 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21582325
chr12 125205201 125205497 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21582326
chr12 125205276 125205612 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21582327
chr12 125205289 125205765 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582328
chr12 125205289 125205765 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069614
chr12 125205292 125205552 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582329
chr12 125205294 125205524 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582330
chr12 125205385 125205399 EBF1 JASPAR yes 124413260
chr12 125205392 125205676 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21582331
chr12 125205392 125205676 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108069615
Genes associated with rs576087862[chr12:125205399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More