EnhancerDB
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  3. rs576153410[chr1:230248458]
Enhancers that have rs576153410[chr1:230248458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 230248068 230248475 vista5491
VISTA
Transcript factors that have rs576153410[chr1:230248458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230248190 230248476 ZBTB33 GTRD no Lung (A549) 21391452
chr1 230248190 230248476 ZBTB33 GTRD no Lung (A549) 107878668
chr1 230248287 230248563 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21391453
chr1 230248287 230248563 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107878669
chr1 230248445 230248458 ELF1 JASPAR yes 36022006
chr1 230248445 230248458 ELF1 JASPAR yes 118477604
chr1 230248448 230248459 FLI1 JASPAR yes 36022008
chr1 230248448 230248459 FLI1 JASPAR yes 118477606
chr1 230248458 230248463 MYC TRANSFAC yes 36022009
chr1 230248458 230248463 MYC TRANSFAC yes 118477607
Genes associated with rs576153410[chr1:230248458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More