EnhancerDB
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  3. rs576212384[chr16:4350346]
Enhancers that have rs576212384[chr16:4350346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs576212384[chr16:4350346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4350162 4351690 TCF7L2 GTRD no Colon (HCT116) 21686585
chr16 4350184 4351667 TCF7L2 GTRD no Colon (HCT116) 21686586
chr16 4350278 4351688 ZNF274 GTRD no Liver (HepG2) 21686587
chr16 4350293 4351634 TCF7L2 GTRD no Colon (HCT116) 21686588
chr16 4350329 4350350 ZNF263 JASPAR yes 9268563
chr16 4350332 4350353 ZNF263 JASPAR yes 9268564
chr16 4350340 4350361 IRF1 JASPAR yes 9268566
chr16 4350341 4350362 IRF1 JASPAR yes 9268567
chr16 4350342 4350363 IRF1 JASPAR yes 9268568
chr16 4350343 4350358 FOXP1 JASPAR yes 9268569
chr16 4350343 4350364 IRF1 JASPAR yes 9268570
chr16 4350344 4350365 IRF1 JASPAR yes 9268571
chr16 4350345 4350360 FOXP1 JASPAR yes 9268572
chr16 4350345 4350366 IRF1 JASPAR yes 9268573
chr16 4350346 4350361 FOXP1 JASPAR yes 9268574
chr16 4350346 4350367 IRF1 JASPAR yes 9268575
Genes associated with rs576212384[chr16:4350346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More