EnhancerDB
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  3. rs57627633[chr12:52518855]
Enhancers that have rs57627633[chr12:52518855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs57627633[chr12:52518855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52518275 52519891 AR GTRD no Prostate (PC-3) 21546230
chr12 52518845 52518865 RREB1 JASPAR yes 120919389
chr12 52518851 52518861 TBX21 JASPAR yes 120919390
chr12 52518852 52518860 MGA JASPAR yes 120919391
chr12 52518852 52518860 TBX15 JASPAR yes 120919392
chr12 52518852 52518860 TBX1 JASPAR yes 120919393
chr12 52518852 52518860 TBX4 JASPAR yes 120919394
chr12 52518852 52518860 TBX5 JASPAR yes 120919395
chr12 52518854 52518874 RREB1 JASPAR yes 120919396
Genes associated with rs57627633[chr12:52518855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More