EnhancerDB
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  3. rs576297185[chr12:52522617]
Enhancers that have rs576297185[chr12:52522617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs576297185[chr12:52522617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52519065 52523398 P63 GTRD no Skin (Keratinocyte) 21546231
chr12 52519499 52523414 P63 GTRD no Skin (Keratinocyte) 21546243
chr12 52520293 52522962 AR GTRD no Prostate (PC-3) 21546248
chr12 52521045 52523202 P63 GTRD no Skin (Keratinocyte) 21546258
chr12 52521596 52523194 ZNF143 GTRD no Epithelial (MCF-7) 21546269
chr12 52521781 52522884 ZNF143 GTRD no Epithelial (MCF-7) 21546270
chr12 52522269 52523433 P63 GTRD no Skin (Keratinocyte) 21546274
chr12 52522612 52522633 IRF1 JASPAR yes 120919880
chr12 52522616 52522628 IRF1 JASPAR yes 120919881
chr12 52522617 52522632 FOXP1 JASPAR yes 120919882
chr12 52522617 52522638 IRF1 JASPAR yes 120919883
Genes associated with rs576297185[chr12:52522617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More