EnhancerDB
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  3. rs576477399[chr5:172227063]
Enhancers that have rs576477399[chr5:172227063]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172226784 172227709 vista50176
VISTA
Transcript factors that have rs576477399[chr5:172227063]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172226947 172227615 STAT3 UCSC Txn Factor no Conserved 108537512
chr5 172227052 172227063 ESRRA JASPAR yes 67828800
chr5 172227052 172227063 ESRRA JASPAR yes 70763522
chr5 172227052 172227065 NR2F1 JASPAR yes 67828801
chr5 172227052 172227065 NR2F1 JASPAR yes 70763523
chr5 172227053 172227068 NR2C2 JASPAR yes 67828802
chr5 172227053 172227068 NR2C2 JASPAR yes 70763524
chr5 172227055 172227072 RARA JASPAR yes 67828803
chr5 172227055 172227072 RXRA JASPAR yes 67828804
chr5 172227055 172227072 RARA JASPAR yes 70763525
chr5 172227055 172227072 RXRA JASPAR yes 70763526
chr5 172227055 172227076 ZNF263 JASPAR yes 67828805
chr5 172227055 172227076 ZNF263 JASPAR yes 70763527
chr5 172227061 172227082 ZNF263 JASPAR yes 67828807
chr5 172227061 172227082 ZNF263 JASPAR yes 70763529
Genes associated with rs576477399[chr5:172227063], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More