EnhancerDB
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  3. rs576493054[chr17:80504500]
Enhancers that have rs576493054[chr17:80504500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs576493054[chr17:80504500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80504496 80504517 IRF1 JASPAR yes 56373132
chr17 80504497 80504518 IRF1 JASPAR yes 56373133
chr17 80504498 80504513 PRDM1 JASPAR yes 56373134
chr17 80504498 80504513 STAT2 JASPAR yes 56373135
Genes associated with rs576493054[chr17:80504500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More