EnhancerDB
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  3. rs576838461[chr17:55543328]
Enhancers that have rs576838461[chr17:55543328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs576838461[chr17:55543328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55543323 55543339 E2F2 JASPAR yes 54957742
chr17 55543324 55543334 NFIA JASPAR yes 54957743
chr17 55543325 55543334 NFIX JASPAR yes 54957744
chr17 55543326 55543332 NFIC JASPAR yes 54957745
Genes associated with rs576838461[chr17:55543328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More