EnhancerDB
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  3. rs576940439[chr5:79487312]
Enhancers that have rs576940439[chr5:79487312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs576940439[chr5:79487312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79487297 79487312 FOXP1 JASPAR yes 63704313
chr5 79487298 79487313 FOXP1 JASPAR yes 63704314
chr5 79487299 79487314 FOXP1 JASPAR yes 63704315
chr5 79487299 79487320 IRF1 JASPAR yes 63704316
chr5 79487300 79487315 FOXP1 JASPAR yes 63704317
chr5 79487300 79487321 IRF1 JASPAR yes 63704318
chr5 79487301 79487316 FOXP1 JASPAR yes 63704319
chr5 79487301 79487322 IRF1 JASPAR yes 63704320
chr5 79487302 79487317 FOXP1 JASPAR yes 63704321
chr5 79487304 79487319 FOXP1 JASPAR yes 63704322
chr5 79487305 79487326 IRF1 JASPAR yes 63704323
chr5 79487306 79487321 FOXP1 JASPAR yes 63704324
chr5 79487306 79487327 IRF1 JASPAR yes 63704325
chr5 79487307 79487328 IRF1 JASPAR yes 63704326
chr5 79487311 79487326 FOXP1 JASPAR yes 63704327
chr5 79487311 79487332 IRF1 JASPAR yes 63704328
chr5 79487312 79487327 FOXP1 JASPAR yes 63704329
chr5 79487312 79487333 IRF1 JASPAR yes 63704330
Genes associated with rs576940439[chr5:79487312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More