EnhancerDB
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  3. rs576990919[chr1:39589398]
Enhancers that have rs576990919[chr1:39589398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs576990919[chr1:39589398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39589378 39589399 IRF1 JASPAR yes 28254361
chr1 39589383 39589404 IRF1 JASPAR yes 28254364
chr1 39589384 39589399 FOXP1 JASPAR yes 28254366
chr1 39589384 39589405 IRF1 JASPAR yes 28254367
chr1 39589385 39589400 STAT2 JASPAR yes 28254370
chr1 39589385 39589406 IRF1 JASPAR yes 28254371
chr1 39589386 39589401 FOXP1 JASPAR yes 28254372
chr1 39589386 39589407 IRF1 JASPAR yes 28254373
chr1 39589387 39589408 IRF1 JASPAR yes 28254374
chr1 39589388 39589403 FOXP1 JASPAR yes 28254375
chr1 39589388 39589409 IRF1 JASPAR yes 28254376
chr1 39589389 39589404 FOXP1 JASPAR yes 28254377
chr1 39589389 39589410 IRF1 JASPAR yes 28254378
chr1 39589390 39589405 FOXP1 JASPAR yes 28254379
chr1 39589390 39589411 IRF1 JASPAR yes 28254380
chr1 39589391 39589406 FOXP1 JASPAR yes 28254381
chr1 39589392 39589407 FOXP1 JASPAR yes 28254382
chr1 39589392 39589413 IRF1 JASPAR yes 28254383
chr1 39589393 39589408 FOXP1 JASPAR yes 28254384
chr1 39589394 39589409 FOXP1 JASPAR yes 28254385
chr1 39589395 39589410 FOXP1 JASPAR yes 28254386
chr1 39589396 39589411 FOXP1 JASPAR yes 28254387
Genes associated with rs576990919[chr1:39589398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More