EnhancerDB
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  3. rs577005448[chr17:2790980]
Enhancers that have rs577005448[chr17:2790980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs577005448[chr17:2790980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2790962 2790982 RREB1 JASPAR yes 52782456
chr17 2790962 2790983 IRF1 JASPAR yes 52782457
chr17 2790963 2790984 IRF1 JASPAR yes 52782458
chr17 2790968 2790989 IRF1 JASPAR yes 52782459
chr17 2790969 2790984 FOXP1 JASPAR yes 52782461
chr17 2790970 2790981 FOXP2 JASPAR yes 52782462
chr17 2790970 2790982 FOXC2 JASPAR yes 52782463
chr17 2790970 2790985 STAT2 JASPAR yes 52782464
chr17 2790971 2790986 FOXP1 JASPAR yes 52782465
chr17 2790976 2790991 MEF2C JASPAR yes 52782466
Genes associated with rs577005448[chr17:2790980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More