EnhancerDB
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  3. rs577027468[chr6:88439119]
Enhancers that have rs577027468[chr6:88439119]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs577027468[chr6:88439119]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88439102 88439122 RREB1 JASPAR yes 103325949
chr6 88439102 88439123 IRF1 JASPAR yes 103325950
chr6 88439104 88439119 FOXP1 JASPAR yes 103325951
chr6 88439107 88439127 RREB1 JASPAR yes 103325952
chr6 88439108 88439129 IRF1 JASPAR yes 103325953
chr6 88439109 88439124 FOXP1 JASPAR yes 103325955
chr6 88439112 88439124 IRF1 JASPAR yes 103325956
chr6 88439112 88439132 RREB1 JASPAR yes 103325957
chr6 88439113 88439134 IRF1 JASPAR yes 103325958
chr6 88439114 88439120 TCF4 TRANSFAC yes 103325959
chr6 88439114 88439129 FOXP1 JASPAR yes 103325960
chr6 88439117 88439129 IRF1 JASPAR yes 103325961
chr6 88439118 88439139 IRF1 JASPAR yes 103325962
chr6 88439119 88439125 TCF4 TRANSFAC yes 103325963
chr6 88439119 88439134 FOXP1 JASPAR yes 103325964
Genes associated with rs577027468[chr6:88439119], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More