EnhancerDB
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  3. rs577389042[chr1:25101719]
Enhancers that have rs577389042[chr1:25101719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs577389042[chr1:25101719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25101699 25101720 IRF1 JASPAR yes 27530455
chr1 25101701 25101722 IRF1 JASPAR yes 27530456
chr1 25101705 25101726 IRF1 JASPAR yes 27530457
chr1 25101707 25101722 PRDM1 JASPAR yes 27530458
chr1 25101707 25101722 STAT2 JASPAR yes 27530459
chr1 25101708 25101722 SPIC JASPAR yes 27530460
chr1 25101708 25101722 STAT1 JASPAR yes 27530461
chr1 25101709 25101730 IRF1 JASPAR yes 27530462
chr1 25101710 25101725 FOXP1 JASPAR yes 27530463
chr1 25101710 25101731 IRF1 JASPAR yes 27530464
chr1 25101711 25101732 IRF1 JASPAR yes 27530465
chr1 25101712 25101727 FOXP1 JASPAR yes 27530466
chr1 25101712 25101733 IRF1 JASPAR yes 27530467
chr1 25101713 25101734 IRF1 JASPAR yes 27530468
chr1 25101714 25101729 FOXP1 JASPAR yes 27530469
chr1 25101714 25101735 IRF1 JASPAR yes 27530470
chr1 25101715 25101730 FOXP1 JASPAR yes 27530471
chr1 25101715 25101736 IRF1 JASPAR yes 27530472
chr1 25101716 25101731 FOXP1 JASPAR yes 27530473
chr1 25101717 25101732 FOXP1 JASPAR yes 27530474
chr1 25101718 25101733 FOXP1 JASPAR yes 27530475
chr1 25101718 25101739 IRF1 JASPAR yes 27530476
chr1 25101719 25101734 FOXP1 JASPAR yes 27530477
chr1 25101719 25101740 IRF1 JASPAR yes 27530478
Genes associated with rs577389042[chr1:25101719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More