EnhancerDB
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  3. rs577478586[chr3:124549409]
Enhancers that have rs577478586[chr3:124549409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs577478586[chr3:124549409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124549400 124549415 HSF1 JASPAR yes 5404794
chr3 124549401 124549414 HSF2 JASPAR yes 5404795
chr3 124549407 124549412 ETS2 TRANSFAC yes 5404796
Genes associated with rs577478586[chr3:124549409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More