EnhancerDB
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  3. rs577479858[chr17:25681449]
Enhancers that have rs577479858[chr17:25681449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs577479858[chr17:25681449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25680782 25681991 CTCF UCSC Txn Factor no Conserved 108245395
chr17 25681201 25681539 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747753
chr17 25681206 25681730 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747754
chr17 25681247 25681557 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21747755
chr17 25681438 25681453 NR2C2 JASPAR yes 53623710
chr17 25681440 25681450 SP1 JASPAR yes 53623711
chr17 25681440 25681461 ZNF263 JASPAR yes 53623712
Genes associated with rs577479858[chr17:25681449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More