EnhancerDB
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  3. rs577638420[chr1:27860770]
Enhancers that have rs577638420[chr1:27860770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
Transcript factors that have rs577638420[chr1:27860770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27860753 27860774 IRF1 JASPAR yes 27706017
chr1 27860754 27860775 IRF1 JASPAR yes 27706018
chr1 27860755 27860770 STAT2 JASPAR yes 27706019
chr1 27860755 27860775 RREB1 JASPAR yes 27706020
chr1 27860758 27860773 FOXP1 JASPAR yes 27706021
chr1 27860759 27860774 FOXP1 JASPAR yes 27706022
chr1 27860760 27860775 FOXP1 JASPAR yes 27706023
chr1 27860760 27860780 RREB1 JASPAR yes 27706024
chr1 27860760 27860781 IRF1 JASPAR yes 27706025
chr1 27860761 27860782 IRF1 JASPAR yes 27706026
chr1 27860762 27860777 FOXP1 JASPAR yes 27706027
chr1 27860766 27860786 RREB1 JASPAR yes 27706028
chr1 27860766 27860787 IRF1 JASPAR yes 27706029
chr1 27860767 27860773 TCF4 TRANSFAC yes 27706030
chr1 27860767 27860782 FOXP1 JASPAR yes 27706031
chr1 27860767 27860788 IRF1 JASPAR yes 27706032
chr1 27860768 27860779 FOXP2 JASPAR yes 27706033
chr1 27860768 27860780 FOXC2 JASPAR yes 27706034
chr1 27860769 27860784 FOXP1 JASPAR yes 27706035
Genes associated with rs577638420[chr1:27860770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More