EnhancerDB
  1. Home
  2. SNP
  3. rs577743825[chr17:28049083]
Enhancers that have rs577743825[chr17:28049083]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs577743825[chr17:28049083]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28049066 28049083 RXRA JASPAR yes 53753491
chr17 28049074 28049087 NR2F1 JASPAR yes 53753493
chr17 28049076 28049094 RARA JASPAR yes 53753494
Genes associated with rs577743825[chr17:28049083], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More