EnhancerDB
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  3. rs577823509[chr17:42189713]
Enhancers that have rs577823509[chr17:42189713]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs577823509[chr17:42189713]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42189705 42189716 E2F4 JASPAR yes 54388742
chr17 42189708 42189714 SP1 TRANSFAC yes 54388743
chr17 42189708 42189718 SP1 JASPAR yes 54388744
chr17 42189710 42189715 SP1 TRANSFAC yes 54388745
chr17 42189713 42189723 ZNF740 JASPAR yes 54388746
Genes associated with rs577823509[chr17:42189713], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More