EnhancerDB
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  3. rs577856153[chr1:39593522]
Enhancers that have rs577856153[chr1:39593522]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs577856153[chr1:39593522]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39593109 39593653 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21325342
chr1 39593109 39593653 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107802887
chr1 39593516 39593523 NKX3-1 JASPAR yes 28254975
chr1 39593521 39593527 TBP TRANSFAC yes 28254976
Genes associated with rs577856153[chr1:39593522], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More